Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMDLFLNRKSFVVKSLAITVTALMMSGANAATSDKEEIRKLRQEVEALKALVQEQRQVQQQQQQVQQQQQVQLAEVKAQPQPAAAPASPLASLKSKTGADVNLYGFVRGDANYIIEGADNDFADVSKSNGKTQDKLRATAKTTRLGLDFTAPV-SGAKVGGKIELDFASSDNDKSENVRIRHAYLTYN----NWLFGQTTSNFLS-SHAPEMIDF--STN-------I------GGGTTRIPQVRYNYKLAPATQLFVSAEEGNSSATGDSVKYRLPVLTAKVTQGYADGNGNASARAFVENYKSGA---GDDKTGWGIAAGTDFKVSDPLKLFADASYVVGNSNYLYGSNSAYTLVNDNIEQNEFVAVQVGGTYKILPNLRSTLAYGAQFADDGTDYAKNNVTANEKVQQAWINFIYTPVKPIDLGVEYVNGKRDTFEG--------------KSYKDNRVGLMAKYSF
2FGQ Chain:X ((3-332))---------------------------------------------------------------------------------------------------SVTLFGIVDTNVAYVNKDAAGD---------SRYGLGTSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRRSTVSLSGNFGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADDNGIRANNLISYYTPNFGGFNAGFGYAFDEKQTI-GTADSVGRYIGGYVAYDN--GPLSASLG--LAQQKTAVGGLATDRDEITLG--ASYNFG-VAKLSGLLQQTKFKRDI--------------GGDIKTNSYMLGASAPVGGVGEVKLQYALYDQKAI----------DSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF


General information:
TITO was launched using:
RESULT:

Template: 2FGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1608 53370 33.19 182.77
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain X : 0.62

3D Compatibility (PKB) : 33.19
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.162

(partial model without unconserved sides chains):
PDB file : Tito_2FGQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FGQ-query.scw
PDB file : Tito_Scwrl_2FGQ.pdb: