Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNPAYRQAVLNAINQIRQDSRQCGQQYFSAAKPLSWNNNLYQGANAHSKDMANNNFLGHVGSTGLDLRARLKKYHMLSKANGENVASGQKTLNEVLAKWIASPLHCSNIMNPRYTEYAIACASDQSAKQRSYWTQQFAGF-
4D53 Chain:A ((4-136))MG--------------------------------------------HKIDTKEDMKILYSEIAELRKKLNL---------NHLEIDDTLEKVAKEYAIKLGENRTITH-TLFGTTPMQRIHKYDQSFNLTREILASGIEL-NRVVNAWLNSPSHKEALINTDTDKIGGYRLKTTD--NIDIFVVLFGKRK


General information:
TITO was launched using:
RESULT:

Template: 4D53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 599 -44166 -73.73 -334.59
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -73.73
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.217

(partial model without unconserved sides chains):
PDB file : Tito_4D53.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D53-query.scw
PDB file : Tito_Scwrl_4D53.pdb: