Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRTMQASDIDSVAQIEKLVQTHPWSRQQFVESLNS-YQCTVIELNNKVVGFCILQPVLDEANLLLMAIDPQMQGKGLGYQLLDASIERLENHPV-QIFLEVRESNKAAIGLYEKAGFHQIDVRRNYYPTQEGGHENAIIMVKSCTDDFASLF
2CNM Chain:C ((4-143))-ISILSTTDLPAAWQIEQRAHAFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVVLDEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQ-GHEDAIIMA-----------


General information:
TITO was launched using:
RESULT:

Template: 2CNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 563 -34581 -61.42 -250.59
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -61.42
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_2CNM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CNM-query.scw
PDB file : Tito_Scwrl_2CNM.pdb: