Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRADIHPKYEKLVATCSCGNVIETRSALGKETIYLDVCSACHPFYTGKQKNVDTGGRIDKFKQRFAGMSRSIKR
3J6B Chain:V ((38-83))-RPAIYHQF-NVKMELSDGSVVIRRSQYPKGEIRLIQDQRNNPLWNPS--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain V - contact count / total energy / energy per contact / energy per residue : 102 -5072 -49.73 -110.26
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain V : 0.66

3D Compatibility (PKB) : -49.73
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_3J6B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J6B-query.scw
PDB file : Tito_Scwrl_3J6B.pdb: