Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MKMFTKLALVSSLAISANAMAMQSMDDAALSA----ATGQDG-INIGIA-LGTSGISIDKLYLHDNDGLATTTGITGATGTAGALAISDVTLKQTGTGNLLDLAIDT-NGASS-TNGAFLNVAATVGAVDIHVGSIGVGTSGTVNE-TTALRGITETA-PTEIISGLDLSLG-QITANVQLGSTPQ---GAMIKVDSALKGG----LTISNLGINDAAGGGSILLDKVMVR----GAGNATGDLD-VKADIS--VTGNGLQVKSTSAQDMNVYVGGVHLGTNTKASDGTWGTGAVKAASIGDLEIQ-GLNVANTTITISGH
4OVY Chain:A ((1-305))EEPLPSWNDSAARRAILEYVKSVTTEGSPRFVPVSERIVTFDNDGTLWCEQPMYVQLAFALDRVRLLADKHPEWRTE----EPFRAVIEKDLPALAKLGAKGLTEL---TMATHAGMTDDEFENIVTEWIRKARHPKFHRPYTECVYQPMLELLAFLRQHEFKTFIVSGAGIEF-MRPWAKEVYGIPPEQVIGSSVKLKYELRDGKPVLVRLAELNFIDDQAGKPVGIRQVIGRRPVMAVGNSDGDYEMLEYVTSGPANGLGLIVHHTDAVREFAY--------DRQSPFGRLDRALTDATSKGWIVIDMQRDWK--VIFPES-


General information:
TITO was launched using:
RESULT:

Template: 4OVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1361 36971 27.16 133.95
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 27.16
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.138

(partial model without unconserved sides chains):
PDB file : Tito_4OVY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OVY-query.scw
PDB file : Tito_Scwrl_4OVY.pdb: