Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRERMEKERVDVLAVKQGLFETREQAKRSVMAGLIYNEKNERFDKPGEKIPVSSELRVKGKKLPYVSRGGLKLEKALKAFDLSVEGKTLLDIGASTGGFTDAALQNGAKMSYALDVGYNQLAWKIRQDPRVVVMERVNFRYAKPEDFTLGIPEVAVIDVSFISLKLMLPPLHAILKEEGEVIALIKPQFEAGREAVGKNGIVRDPQTHQKVLEDILSFAAQGGYDVLELSYSPITGGEGNIEFLAHLRKVPESGTINSAINMAEVVSNAHEQFDHK
4QPP Chain:B ((81-113))----------------------------------------------------------------------------------ALRGKTVLDVGAGTGILSIFCAQAGARRVYAVE-----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4QPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 97 -6258 -64.51 -189.62
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -64.51
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.696

(partial model without unconserved sides chains):
PDB file : Tito_4QPP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QPP-query.scw
PDB file : Tito_Scwrl_4QPP.pdb: