Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEATNAARRRTSSIEQRNSYEALMHAIENRVNGDTVNITSIESKDAAASTGGYAAAPATATAAPKHVDPMATNGISQSEMLSAHLTEQLTDIPAALSPGSCVRQQSQQLPPAQRKKYGKEEVPTVAAAETDAAVRNTQQPAVPSQQQQQQCQRADMKHHADVADVGSEDDDDDGGAAQGDNEQALSLAALHSQPPITRRHAPTAMLEADEDEDDDDGTAYDGVKTQVLFKPVNRAAYREVVASTWKPEGLTRRTNTAGSGSQQNRNSNSSSSASEYKDSPHHPNSSDDDEEAIATMATRNKTGRAAARTAPSMKVFRVPSFPYGGGVTEQQARILQRQFDECIHNGEHLSSNAAGPALITKRDFDSGNYTEVSAATAQMDTTSFQPTSPYEFVVEVERDVRFDAVKAREERRHRFRQLVREKRAPATMGTFNLRVIMDPFKTGFEEEKNFPIVPGTVIAGRYEIIQMLGKATFSRAVRCYDLQDPIYNEDEESDEGEYEDDVDDDDANSATASPADGTENVACIGKGGVTTASCRGSDTATTASASKQQVKSVNTATKSRLKPKRRILGYGQVCLKIINNTKDFFDQSLDEIRLLTLLNRQKDPDDAHIVRLIDAFYYKEHVMLVTELLRDTLYDYGKYNREEEKEFYFTLPRLRRLTRQIVEALTYV--HSLNLIHTDLKPENIMFVSYSRCIVKVIDFGSSCFLSDHLSSYIQSRSYRAPEVVLGCDYDGRIDVWSLGAILVEMVTGDVLFTSDTVPEMLARIVYVCGTPFPRRMLWEGRHTSDYINKFGCIYEYGGGADGQHDRPEKGDTDDGEEPYCLYTPVPTMAPHTCASSRKSRAAAAVPPPPRTTTAPYSVLREKLAAANMVDEEFIAFVEACLMLDHKKRPTSAELLEHPFIRDVVL
4YLL Chain:A ((22-260))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQE-------------------------------------------------------------------------------------WVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTE-KYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTN----FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YLL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1091 -126665 -116.10 -550.72
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -116.10
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.316

(partial model without unconserved sides chains):
PDB file : Tito_4YLL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YLL-query.scw
PDB file : Tito_Scwrl_4YLL.pdb: