Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPSSSSVTQPEPEATQGIELPACARKPRDPDFEAPASLHAQSKESNPLVLAPPPCPIICPEHERKMRRTSKSCIVPPPRQRQFMGDVVGLKVPDLVTGWKLPRKSSAHRCFLAAGGDVTVEPQPSSLAGANTKCPVRVPACAGSPTCGPRGENGVLIVSQDDRPAGLVNSRRRYSKESKPAVNGEDGVLLSEYEEDSADAAVRQTVARVRSKNCVLLIVLLVIIIVLAVAGGVGVGFVNKHYTTLTHRMYLESGERIVLNSSVMLLKNYHETLRADARHLLSFVRSSMIGRKPESIAVVQSTLYLPFFEAWSTWLFSSNVPSTHSIYVSMCGEPLANTVDCPFMALTIVCMPNVLQAACFYMHSDEVDRSRMIVNRIEVNESGIPRIGAFYKYVPLKVNYAHYQTNNDYGYFLDQDCAASLDGKVHTTLTIRRQIVVGDLVIICDASGFFERWFQRFEKGLQKKKDSHSVLFVNDGTVLAYDCGAPPRHRHVVSPCSMRLVPHKMGDCMAGKADMIDRIVDTFTVAMQRNKLMKRGGLSKDHVALTERVGDYIVVYQDFLSFRVGDGEPKTVFIAAYAVPLDTSLGRDGFVQISICVVIIIICMFLLGGVAMVAVNQMMRVVEVISQLSTHAATYDTKRMRSVLDRQKPGMLARVITSADIINCEFQHILTNLNAYRPFLPQSLLTKSSYSFSDEPLEPPSLWRSDVALGGSAADDVVVDEDGVPAKPLPRFHLKNTLEGSVSNPVENWRLLQRGFHRTKSTILVVSLSNVALDAGESVDAVNLFVQTVLNHAAIANGVVEVIEFQKIVVSFNSHFPVPRHQEKACLCALAIREEFRDRGCSISIGIASGYNYVGTTGTEQQKARVIMGESVVVAQSLTSLKNYLGCSILATDQVVFEALVTAVAVDVVQLYYEHNHQWVQYGVSEIIGNRYAVLSPDMQLVKSVFKLVRYRQAEEALEAVRRYVDAAAERRETPSWPVRRIHALVERQQLLIRSGYRRQRLQWQALEGDEIIMKHLSEENQSYNSKRQPRLMATVSTATVDSLATLSTHAKAAPCEFGFVSGDVLNAGSEAELARALVGEQSKLSMTRRQLAPIPSSCFSEDALFPVFTVKSSDGDEEERSPGSSRLSSQHNRVTDGNAEASGADSEEMRPVLLVEPQTLRSEERHDVRIGALLPPFTVTTSSPFLPAHDMEYPCTTAGISSMLSNSRRHSALDRQRHIAPTPLHDGTCHASTYATSGALGGVSGGKSSIGASLATTSAGNLGRTADSALKQSSENVAGLAKMHCSYKLPQRIVSVNGQVFHRTSQLVGRGSFGEVYVAISE-TGSLGAMKVFPLNDN---------NAPQLIREVETLSQM-RHENIVGYDCCAVQDNFFFIICEYLAAGTLGSLIQKLGVIPERAARKYACDMLFGLGYLHQHSWLHCDIKPENILVTSDGTCKLADFGAASLGRSLTDAVSVRGTPRFSAPEAIL-------GTWNQQADIYSFGITVAQMVTGVHPWHKYTEPDHLFVAHYAGEIRHSLQTGMPCAMQPDLPTNLQDKELESAIHRCCEFDPARRPTAEELVTLLS
2Y7J Chain:C ((95-362))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI---------MEGQYQ---FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF


General information:
TITO was launched using:
RESULT:

Template: 2Y7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1126 -35888 -31.87 -143.55
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain C : 0.53

3D Compatibility (PKB) : -31.87
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_2Y7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y7J-query.scw
PDB file : Tito_Scwrl_2Y7J.pdb: