Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRRALLLLLLSFLAPWATIALRPALRALGSLHLPTNPTSLPAVAKNYSVLYFQQKVDHFGFNTVKTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPMSVLLARSLEVRHMKNWIRDFYDSAGKQH
4MEB Chain:A ((58-163))----------------------------------------------------------------------------------GTPIVFIHGFGSTWKMWEP---VMLSYMK--DHKVIAIDLPGLGQSGPILN---------DDYSAENTSKILIGAIKKIAG------KGPIYYVSHSLGNTASYPLVANNQGYIKKAVFMDSPIP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 506 -88605 -175.11 -843.85
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -175.11
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_4MEB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MEB-query.scw
PDB file : Tito_Scwrl_4MEB.pdb: