Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSWKNWLIKINYCVYKKKRKGRMRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKINEGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYIS-NQSDATFKSKMSAIMGDDW------------DPKEKLISSKMAGKFMEAIYNQN-------GFVLESLTKTDFDSQRIAKGVS--VKVAHKIGDAD-EFKHDTGVVYAD-SPFILSIFTKNSDY------DTISKIAKDVYEVLK
5F83 Chain:A ((5-264))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFKTDLEKLEREK--AAQIGVAIVDPQGEIVAGHRMAQRFAMGSTFKFPLAALVFERIDSGTERGDRKLSYGPD-------MIVEWSPATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREIGGPAAMTQYFRKIG-DSVSRLDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATLRAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAVYTTAPKLSAVERDELVASVGQVITQLI-


General information:
TITO was launched using:
RESULT:

Template: 5F83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1201 -16388 -13.65 -71.25
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -13.65
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_5F83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F83-query.scw
PDB file : Tito_Scwrl_5F83.pdb: