Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESLIQTYLPNVYKMGWAGQAGWGTAIYLTLYMTVLSFIIGGFLGLVAGLFLVLTAPGGVLENKVVFWILDKITSIFRAVPFIILLAILSPLSHLIVKT-----SIGPNAALVPLSFAVFAFFARQVQVVLAELDGGVIEAAQASGATFWDIV-GVYLSEGLPDLIRVTTVTLISLVGETAMAGAVGAG----GIGNVAIAYGFNRYNHDVTILATIVIILIIFAIQFLGDFLTKKLSHK
3PUY Chain:G ((80-249))---------------------PVLLWLWNSVKVAGISAIGIVALSTTCAYAFARM-------RFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYL-GGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGM-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 518 -65507 -126.46 -409.42
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain G : 0.61

3D Compatibility (PKB) : -126.46
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.237

(partial model without unconserved sides chains):
PDB file : Tito_3PUY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUY-query.scw
PDB file : Tito_Scwrl_3PUY.pdb: