Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEYKNIIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEIL-GNRVELVVGDIAD-AELVDKLAA-QADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAA-----------DAYDHVTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWKAEKEAVEANYAKTQEIITV
1BXK Chain:B ((2-339))----RKILITGGAGFIGSALVRYIINETSDA-VVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF----------FTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVA------LRYAIDASKIARELGCVPQET-FESGMRKTVQWYLANESWWK-------------------


General information:
TITO was launched using:
RESULT:

Template: 1BXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1660 -43921 -26.46 -142.60
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -26.46
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_1BXK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BXK-query.scw
PDB file : Tito_Scwrl_1BXK.pdb: