Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTH--FAHKSLKDCDF--FFENESPEHL---------ANKESLYHWLKKETKVQLEYPLSELK--QIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKGKQVLRLKYLIYQDLRGK-LHYQIKEFSYGQGSLLEILRLPYKKQKISHFTV-----SEDKDICRYIRQQLYY------QNLFWMKEQAEAYQKGENILTYGL----KEWYPQIRPIVGKFFQIEQDLTSYYQ---HFYTYYQKN--PQNDWQKLYPPAFYQQYFLKNMVE--
5MPT Chain:A ((7-385))LGGSILPKSAILDAFRIAKEATDDFILNGQLGTYYNEVMPRSTELCVAHIVNAFEQLGCPIRSAAAYQRLERVPYLPKHERFMNLIYGLLEEARLIDINGSEITRTSVPVSTKSVETMLEELLHDEPLHAAEHKLTSLTGSKFADCITGKEDGLQLIFGS--PEGREIVTDVYAKSPINAVWIQQAEFFLEQLVKRLP------NTGEPLRILEMGAGTGGTTVKMLPLLERLGVPVEYTMTDLS---SSLIAAARKRFKKYPFMKFKVVNIESPPDPQLVHSQHIILATNCVHATRNLEISTRNIHRILRPDGFLLLLEMTEQVPWVDFIFGLLEGWWLFEDGRRHALQPATHWKKILTSVGYGHVDWTEGTRPEANIQRLIIALASEP


General information:
TITO was launched using:
RESULT:

Template: 5MPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1352 -5852 -4.33 -19.12
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -4.33
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_5MPT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MPT-query.scw
PDB file : Tito_Scwrl_5MPT.pdb: