Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKNSIFLLKKRSLKGKESDMRQLAKDINAFLNEVILQAENQHEILIGHCTSEVALTNTQEHILMLLSEE-SLTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIAEEHHHHHEHTLLTYEQVATQFTPNEQKVIQRFLTALVGEIK
1JGS Chain:A ((1-138))---------LFNEIIPLGRLIHMVNQKKDRLLNEYL---------------SPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQLVGQDLH--QELTKNLTADEVATLEYLLKKVLP---


General information:
TITO was launched using:
RESULT:

Template: 1JGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 372 -9318 -25.05 -68.01
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -25.05
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_1JGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JGS-query.scw
PDB file : Tito_Scwrl_1JGS.pdb: