Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKLLKIMQELREKCPWDQEQTSMSLTKYAIEEAYEVEAAIRQG------------DINEIRNELGDLLLQVVFQSQMFSEQGAFNFQDVVEAISEKLVRRHPHVFQADQFNNLIPEQVSELWKQIKQQEKQGKPQSRLDEIKHGPALSQAQEIQKNVAKVGFDFETVEDAYTKLEEELDEFKQALKNQNSDEIQDEFGDCLFSLVNVGRKLGISSESSLLSTIHKFRSRFAFIEEQAIKQQRTLEDMTLSEMDELWNQAKRQLKSGEKPHAIQHEILEK
4QGP Chain:B ((15-112))--ELLDILREFRDSRGWLKYHTPKNLAVSISIEVAELLEIFQWTRSSDEEFEVLERRKGEVEEEIADVLIYLLFLCDV----AEINPIEAVKRKMEKNERKYPK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4QGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 179 -6556 -36.62 -76.23
target 2D structure prediction score : 0.93
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -36.62
2D Compatibility (Sec. Struct. Predict.) : 0.93
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_4QGP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QGP-query.scw
PDB file : Tito_Scwrl_4QGP.pdb: