Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALLPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQVDRHIQLIVMDLSESKDEPMVFINPKVTPLTEETQPYEEGCLSVPQIYDKVDRPSRVKIEAINLEGQAFEIEADGLLAVCIQHEMDHLNGKLFVDYLSPLKRQRVREKVEKIVRQREREKVAVKR
4AL2 Chain:C ((1-162))-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGET-GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD------------


General information:
TITO was launched using:
RESULT:

Template: 4AL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 774 -98801 -127.65 -609.88
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.88

3D Compatibility (PKB) : -127.65
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.655

(partial model without unconserved sides chains):
PDB file : Tito_4AL2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AL2-query.scw
PDB file : Tito_Scwrl_4AL2.pdb: