Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIHLFFRNNKKSKMHLKLNNYLISGEYMNIPRFGLGTFRLKEQAVIDSVKNALDVGYRAIDTAQIYENEAAIGQAIAESGVSRQDLFLTTKIWVDNFAQDKFIPSLKESLQKLRTDHVDLTLIHWPAPDLGVSIPEIMQLLLEAKQQGLTKQIGISNFNIALTQQAIDTIGVEHIATNQIELSPYLQNHKLVNFLQEKNIDVTSYMTLAYGKVLQDPVLAEIAAANKATTAQIALAWALQRGFAVIPSSTKRENLISNLKAQDIELTAAEMQMIAELDRNSREVSPEPWAPVWD
3WBW Chain:B ((25-277))------------------------------MPQIGLGVWETPPDETAEVVKEAVKLGYRSVDTARLYKNEEGVGKGLED----HPEIFLTTKLWNDEQGYDSTLRAYEESARLLRRPVLDLYLIHWPMPAQGQYV-ETWKALVELKKSGRVKSIGVSNFESEHLERIMDATGVVPV-VNQIELHPDFQQRALREFHEKHNIRTESWRPLGKGRVLSDERIGKIAEKHSRTPAQVVIRWHLQNGLIVIPKSVNPKRLAENLDVFGFVLDADDMQAIEQMDRKDGRMGADP------


General information:
TITO was launched using:
RESULT:

Template: 3WBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1361 -108412 -79.66 -428.51
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -79.66
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_3WBW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WBW-query.scw
PDB file : Tito_Scwrl_3WBW.pdb: