Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGLLFVVSAASGTGKTSLVKALL-DRVSNLHVSVSHTTRGQRPGELDGVHYHFTTKDEFLDQVNQGGFIEYAEVFGNYYGTSQATVKQQLAQGHDVLLEIDWQGAEQVRKLFPESKQIFILPPTQFDLRQRLSNRGTDSVEVIEHRLSCAVEDMQHYVNFDYIIINDDFNKALHELEAVITANRLVLSQQAKRHQNLIQDLITPQPKQE
4QRH Chain:D ((8-203))-KGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHL--------------IQSRINEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRK-------------


General information:
TITO was launched using:
RESULT:

Template: 4QRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 760 -35298 -46.44 -195.01
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain D : 0.78

3D Compatibility (PKB) : -46.44
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4QRH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QRH-query.scw
PDB file : Tito_Scwrl_4QRH.pdb: