Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLK--SAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATA--SSKMVCGQVLDLQAEA-KQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGEN-AKELVEISQFLLARTN 3KRF Chain:D ((21-295)) ---------------------------AAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGG-DESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAA-----ATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAI-LGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN

General information: TITO was launched using: RESULT: Template: 3KRF.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1348 5080 3.77 18.88 target 2D structure prediction score : 0.68 Monomeric hydrophicity matching model chain D : 0.82 3D Compatibility (PKB) : 3.77 2D Compatibility (Sec. Struct. Predict.) : 0.68 1D Compatibility (Hydrophobicity) : 0.82 QMean score : 0.482

(partial model without unconserved sides chains): PDB file : Tito_3KRF.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3KRF-query.scw PDB file : Tito_Scwrl_3KRF.pdb: