Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------MNFIKK-----WSVGLLSMLPVLAMAHPGHDHV---HSGFMAGFIHPFT-----------GLDHLIMA--LGFGVLLWSAAKQWKIAGVITLSITLV-----IGFLVG-AQGLVPANVAEYGIVTSLIITAIALWTKSNRILPIAAALLASFHGMAHGVELAHAGHIVALVTGMVAGMALIYCGGLALGAVFTRYVPYGKKIVGACAALVAVIGLS 5LQJ Chain:A ((3-216)) DTKEQRILRYVQQNAKPGDPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYD-VDTLDMVFLDHW--KDRYLPDTLLLEK--CGLLRKGTVLLADNVIVP--GTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ--GPS

General information: TITO was launched using: RESULT: Template: 5LQJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 933 -65711 -70.43 -365.06 target 2D structure prediction score : 0.42 Monomeric hydrophicity matching model chain A : 0.68 3D Compatibility (PKB) : -70.43 2D Compatibility (Sec. Struct. Predict.) : 0.42 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.232

(partial model without unconserved sides chains): PDB file : Tito_5LQJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5LQJ-query.scw PDB file : Tito_Scwrl_5LQJ.pdb: