Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRIIQSVLSVSVLASMMSMAFAAQNEQEQAEQTLEKPAEPVKLETIFVTAEEQV----KQSLGVSVITKEDLAKLPVRNDISDYVRRMPGVNLTGNSATGQRGNNRQIDIRGMGPENTLILVDGKPINSRNSVRYGWKGERDTRGDSNWVPAEAIESIEVLRGPAAARYGSGAAGGVVNIITKKVTNETHGSVEFYTSQPEDSKEGSSNRVGFNVSGPLIKDVLSYRLYGNYNKTEADDVDINKSIGSTAAGREGVKNKDISGRLAWQATDQQTVLLDVSSSKQGNIYSGDSQLNANAEADAILSQLIGKETNTMYRDSYALTHEGDWSWGKSKLVAQYDKTHNKRLPEGLAGSVEGKINSLDDKATSRLETLRFNGEANIPFEYYLPQVLTVGTEWVEDRFKDNVSTTQGKDSSGSGYGDQLAKGDRSKMESRIASAYIEDNLKVTDSTDVVLGLRFDDHSKSGSNWSPSLNITQKLNDNFTLKGGVAKAYKAPNMYQNAEGYLLSTNGNGCPANIESRCLLQGNGDLKPETSVNKELGIQFQRD-----IVNASLTWFRNDYKDKIVAGTHVVGTAD---GSSTNANTGAVTNTKWNILRWENTPKALIQGFEGSLGLDFG-DIRWTNNFTYMMDSKDKQ--TGNPLSLVPIYTINSIFDYDIT--DQLDVNFVFTQYGRQKSRQFAENRLESGIGSGGANSALKPSTVKSYSTAGINVGYKFSDQISTRVGVSNLFDKQILRDSNSISQTYNEPGRAYYASLKYSF
2HDI Chain:A ((7-639))---------------------------------------------ETMVVTASSVEQNLKDAPASISVITQEDLQRKP-VQNLKDVLKEVPGVQLTNEGD-----NRKGVSIRGLDSSYTLILVDGKRVNSRNAVFR------HNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDD--------------EGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDS-----------------------N-RLERQNYSVSHNGRWDYGTSELK--YYGEKVENKN-P------G------NSSPITSESNTVDGKYTLPLT-AINQFLTVGGEMRHDKMSDAVNLT---G------------GTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNS----C----RGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGF-ETGANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYN-DGRDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSMYMSGHYTGQK----------------------------GGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSR---------NEDGRRYFMAVDYRF


General information:
TITO was launched using:
RESULT:

Template: 2HDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3482 228496 65.62 393.28
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 65.62
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.208

(partial model without unconserved sides chains):
PDB file : Tito_2HDI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HDI-query.scw
PDB file : Tito_Scwrl_2HDI.pdb: