Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVLRVLVTTTALLAAGAAMADEAVVHDSYAFDKNQLIPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWTDDVSVNGTKYDLDMDNNNVYLNAEIRPWGASTNPWAQGLYIAAGAAYLDNDYDLAKRIGNGDTLSIDGKNYQQAVPGQEGGVRGKMSYKNDIAPYLGFGFAPKISKNWGVFGEVGAYYTGNPKVELTQYNLASVTGNPTSAQDAVDKEANEIRNDNKYEWMPVGKVGVNFYW----------------------------------------------------------------------------------------------------------------------
5DXF Chain:B ((18-528))PKEFEGKGKLKLSGRILNVMTSLPLQIVRGNSALYSSQHFLAENKEWETHLIAWTGDEEDKSKIEKKLCDASGTPNIHPVWLLRRDQGRWRKYAENVLWPVFHYIQPSDGKAETDAWHDYVKFNEAYLNKIKSVYKPGDIIWIHDYYLLLLPQLLRMEFPNAYIGFFLHVPFPSSEYFRCLSKRSQLLDGMLG-ADKIGFQ-SDSFQRH-FISCCARVLGCEVN--------------------------RDSVSAYG-----------TTISVETLPIGIDTEKIEHDAF--SSELGVEEKVQALKQVYKGKKLIV-GRDRLDKVRG-------------VIQKLEGFEIFLDMYPEW------------RETVVLIQVSSPGYSHS-----ANVETRVTEIISRINSKYGNLNHTPVLHYQMRVAKEEYLALLRVADLALITSVRDGMNTTSLEFVICQKYNNSPLILSEFTGTATVLKDAIMVNPWDSVGVAKTINDALMLSTKEKVSLESKLYEKVLSNTVQNWTSTFICDILSHSI


General information:
TITO was launched using:
RESULT:

Template: 5DXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 668 17602 26.35 100.01
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : 26.35
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.008

(partial model without unconserved sides chains):
PDB file : Tito_5DXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DXF-query.scw
PDB file : Tito_Scwrl_5DXF.pdb: