Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDETKMSYQSIFRPDAFANKVIIVTGGGSGIGRCTAHELAALAAQVVITGRKIEKLEKVSQEII-EDGGLVHFIVCDNREEEQVKNMIAEVIEKFGKLDGLVNNAGGQFPSALENISANGFDAVVRNNLHATFYLMREAYNQWMAKHGGSIVNMTADMWG-GMPGMGHSGAARSGVDNLTKTASVEWGKSGVRVNAVAPGWIV-SSGMDNYSGDFAKVIIPSLAGNVPLKRMGTESEVSSAICYLLSDAAAFVSGVTLRIDGAASQGTRMYPLAEATNSQSYNGFHRAFIPEIFKKDKTEKVEQSNNSGSE
4FC6 Chain:D ((10-270))-DDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS--PLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGA-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1465 -104356 -71.23 -404.48
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.76

3D Compatibility (PKB) : -71.23
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_4FC6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FC6-query.scw
PDB file : Tito_Scwrl_4FC6.pdb: