Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKEITFSVFFLQFIEKSLYFASYSFFVTIRNGTSKKMKKQGTRYMEKKQKIILGATSALTIVILILSLFFVIRSSTKKEPIIPEKKITEKAKEPTDDKQQLVTQAKNLAQSYDYDQAIALLEKDSKNGSTETQQLLQTLKKEKEQLIDWSDPTQISHVFFHSLIVDPQKAFHSQQAQGYKDYMVTVEEFNRSIEQLYQNDFVLVNLNDLIQKDEQGNLSFNGLALPEGKKPLVLSQDDVSYYEYMDNSGFPSRLV-VSNNNEIKNVYKEKDKEEIGDFDMVPLIDAFVKKHPDFSYRGAKGTLALTGYNGVLGYRTSKSQYGDNEKTKKEIKEAKKVAEQLKKDGWSFASHTWGHLNMTQA-----SLEDVKKDNELWQQEVAPILGK---TNILIYPFGADISDWQPYSAE--NQKFAYLKSQGFDI-FCNVDASTPAWGQLGTDFYRNARINIDGIRFQSDLDGKNPILDPFINVHDVYDKEARESA
2W3Z Chain:A ((84-243))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGYA-YSAETVRQMMNN-------------QKLVFLTFDD----------GVDPNMTPK----------------------ILDVLAQQ----------HVHATFFLVGCNITD--------------------KVKPILQRQITEGHALGIHSFSHVYSLLYPNRVGNTQQIVSEVTRTQNALKDQLGQNFKTGVWRYPGGH-------LSWTGLEAADKQLAAQGIQWMDWNAAV------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2W3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 566 1126 1.99 7.93
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 1.99
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_2W3Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W3Z-query.scw
PDB file : Tito_Scwrl_2W3Z.pdb: