Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKSKPIIIGVTGGSGSGKTSVSRAIFN----NFPDHSIMMLEQDSYYKDQSHLSFEERLNT-----NYDHPFAFDNDLLIQHVGDLLNYKAIEKPVYDYVAHTRSQATIIQEPKEVIILEGILILEDERLRDLMDIKVYVDTDDDIRIIRRIKRDMEERGRTLDSVIEQYLTVVKPMYHQFIEPTKRYADIIVPEGGENHVAIDLITTKVASFLNHK
1UEJ Chain:B ((20-232))---GEPFLIGVSGGTASGKSSVCAKIVQLLGQ---QKQVVILSQDSFYR---VLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILN--


General information:
TITO was launched using:
RESULT:

Template: 1UEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 940 31586 33.60 159.52
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : 33.60
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_1UEJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UEJ-query.scw
PDB file : Tito_Scwrl_1UEJ.pdb: