Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MTRKISKIGASLL----------VLAVATTIDYRQSEAKTIGN--------VVYRETAKSMLKKAMDNQPESSYWFPEDS--LAWSFGKDTDTKYNTSVV--------PLAERVSKATLPNMNVTQTEEVKVVALSAM---NSSINGNASRG------IDIFYA------NVFSYWQYID--QLVYGGALLVKDHRIAKSSCDGCSP--
5HGZ Chain:A ((2-212))MTEEERSSALSEVSLRLLCHDDIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGAIVGMIVAEIKNRTK---IHKEDGDILASNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENRDFKQHHYLPYYYSIRGVLKDGFTYVLYINGGHPPWTILDYIQHLGSALASLSPCSIPH


General information:
TITO was launched using:
RESULT:

Template: 5HGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 601 30637 50.98 192.69
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 50.98
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.70
QMean score : -0.009

(partial model without unconserved sides chains):
PDB file : Tito_5HGZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HGZ-query.scw
PDB file : Tito_Scwrl_5HGZ.pdb: