Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFKAVSEGEKTFTHLVVAGHTPDPISPCGACRQVMAEFCSPDMPVTLVGDNGVTKATTVRALLPYAFTEKDL
1UX1 Chain:C ((3-130))----RQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNHAEQTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL


General information:
TITO was launched using:
RESULT:

Template: 1UX1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 643 -80077 -124.54 -625.60
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain C : 0.86

3D Compatibility (PKB) : -124.54
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_1UX1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UX1-query.scw
PDB file : Tito_Scwrl_1UX1.pdb: