Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGFRKDFLWGGATAANQCEGGYDEGGRGLANVDVVPIGKDRFPVITGKKKMFEFDEDHFYPAKIAIDMYHRYKEDIALFAEMGFKTYRMSIAWSRIFPMGDEKEPNEAGLKFYEDVFKECQKHGIEPLVTITHFDCPMHLIKEYGAWRSRELVGFYENLCRVIFNRYKGLVKYWLTFNEINMILH-----APFMGAGLYFEEGENEEQIKYQAAHHELVASAIATKIAHEVDPENKVGCMLAAGAYYPYTCNPEDVWASRKSDRENYFFIDVQSRGEYPAYALKEMERNGIQIEMEPGDAALLKEHTVDFISFSYYSSRVSTTDNE------LLEQTAGNIFASVKNPYLQASEWGWQIDPLGLRITMNDIYDRYQKPLFIVENGLGAVDTPDENGYVEDDYRIDYLAAHIQAMKDAVELDGVDLLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDNQGNGTLARSKKKSFNWYKKVIDSNGENLSND
4GPN Chain:B ((9-480))----ENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHG----VAREITAGVLEGKYYPNHEAIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIGCMVAMCPIYPATCNPKDILMAQKAMQKRYYFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEGTVDYIGFSYYMSFVIDAHRENNPYYDYLETED-----LVKNPYVKASDWDWQIDPQGLRYALNWFTDMYHLPLFIVQNGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVIASNGDDI---


General information:
TITO was launched using:
RESULT:

Template: 4GPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2748 -90787 -33.04 -196.93
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -33.04
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_4GPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GPN-query.scw
PDB file : Tito_Scwrl_4GPN.pdb: