Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRYSTILISTFAALSLSLTINQTVHTEEIETAKWTETKWANVNRITFQDEFSSFNSGVAKLRKGQTATIKAKIDYSGDLAPILQSAVTFENVDPALSIGYDENTLTIQHKQAIFTFTVTLNQDLLKPALFTVKVSDGLPNDHHHLTPYSQRQTIEQDSAIDSGGDLVEEPTDKPENENKPEVPPTENPDGEQKPEIEPGEEPDTETQPEPDNESKPEITPGEKPDVDPEEKPDVTPEPDTDSGNQTVPETNPDTDNETENPEKPEVAPEEKPDVTPEPDTDSGNQTVPETNPDTDNETENPEKPEVDPEEKPDVTPEPDTDARDQGIPEKINKKTIQEDGKKESKKSNLAILKINEEQLNKKSRIFDSAQSAETLKSSKDTTFASPETKNKQLPKSGESQNKVILWSGIILLSIATMLSAKRFKQNRSL
5LV6 Chain:B ((35-40))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRRRHI----


General information:
TITO was launched using:
RESULT:

Template: 5LV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1 -367 -366.50 -61.08
target 2D structure prediction score : 0.17
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -366.50
2D Compatibility (Sec. Struct. Predict.) : 0.17
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 1.087

(partial model without unconserved sides chains):
PDB file : Tito_5LV6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LV6-query.scw
PDB file : Tito_Scwrl_5LV6.pdb: