Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIIVTTCLLATGFLLTACGESQSSNESQQTTIQFMHSSVEQERLSVINELVADFEKENPDIKIKQVPVEE-------SAFNTKIVTLARSGKLPEVMEVS-Q-DFAKVMDKDELIDQTAVQNVIEEAGEDNYYDGAKNLVRSEDGKSYIAAPISGWVQGIWYDKEKLSEAGFS---EPENWDDILKIAQHFTDKENK---QYGIAMPTAEGTMSEQAFSQFALSNGANVLDDEGEVTI---DTEKMREALSFYQNLSQY-TM-P-G------SNDVTEIKDAFMNGTAPMAIYSTYILPSVYEAGNSENIGFA-IPTQKDQ-A--VYGTVSGLTISSGLDEKQKEAAEAFTAFLSQPKNMEKWVLMSPGGAQPVNKQVVELDGYKENEVIKSFGELPSEIASAFDEVQVFGLVGEKNFTKMGDITSSGVIGKAVNQVTVGNEDVDQALADAQKNTK
4R9F Chain:A ((41-441))-----------------------------KQVVLTLWYPWAG-PDGDAVVSLAKEYSKTHPNVQIKAQMVSGAGIAATQGGGQGKFLSAVAAGNPPDLVLYWGQDALPGLADQGAIIPLDDYLK---DVDTSKFFEAAYNAMK-YKGKIY-GLPEMVNVRVLFWNKDLFKQAGLDPNTPPKTIAELDQMAAKLTKTKNGTIEQMGFIPWIGQ-----GVPHVMAGVFGTSLVDSNGNPILSPDKNPQLLNLLKWEVSYSDKYGAMNINKFIAGMSQNSSQANDPFVLGKVAMMISGEWQINANKQYNPKLNFGVGPIPQAPGGKPMPSLMDGNTWMIPKG--SKHPQEAMDFIKWTMDPQRIADTADK-VYNIAPIVEAAKI-QKLNNDPYFKEVLN-------VAQKGSI---YYTPAAKGMLST--ETAANNAFQAAQYKKSTPEQALKNAQAEA-


General information:
TITO was launched using:
RESULT:

Template: 4R9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2092 105557 50.46 285.29
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 50.46
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4R9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R9F-query.scw
PDB file : Tito_Scwrl_4R9F.pdb: