Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSLIEKQIVNKEIRVTDPLFEVIHQIQAENEEPLAALNTGYHEPADIRKRLENIISDKVDDTVTVLLPFYTDFGKHISIGKNVFINRQVMFVDLGGICLEDSVLIGPRVNLITVNHLTDPKER-RGLS-VKPIHIKKNAWIGAGATILPGVTIGENAIVAANATVTKDVPDNTIVAGIPAKIVKPVERII
4EGG Chain:E ((17-186))----FDQTLINERLRAKVICFALNHT------NPVATM---------MRKVLIDALFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDN--


General information:
TITO was launched using:
RESULT:

Template: 4EGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 840 -70612 -84.06 -420.31
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain E : 0.80

3D Compatibility (PKB) : -84.06
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4EGG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EGG-query.scw
PDB file : Tito_Scwrl_4EGG.pdb: