Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLF----------GKDANIT----FVNNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRLEVG--ISFTEFTYQILQSIDFLHLHKTYDVQLQIGGADQWGNITAGLDLI------------RKLEGPEA---EAFGLTIPLMLKADGTKFGKTAGGAVWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRLAEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKVID
4OJM Chain:X ((52-390))-----------------TKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWMYLEGYKAFTLIGGSTAKIGDPTG--------SSSDATMNMTKIHYQLKKLWENVDTQMRARGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFAEFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPKTALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKLFTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTGQM---------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1271 -38565 -30.34 -128.55
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain X : 0.76

3D Compatibility (PKB) : -30.34
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4OJM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OJM-query.scw
PDB file : Tito_Scwrl_4OJM.pdb: