Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTSTSVALIASVLRQPRVGDDLQWVRYDAPFRTAQDYAAAEYLYRLRLCSLRLRSSLLSPSLPRTGPVSEVAHLLPHYPVQITAQLVYMDEPLSPVVESAAVYASAAALLPPASPVGGDTDTHAEMEVVYTFTDEWLVFPLELCDVPLDASCKLHLWHR------DTHVAEAALHVYSVAGELCVGQRQLALSTGGDAPSDEQLWSTSTRAAELLADFHRGMMPPIPWLDTLSIQQLEAEHARHGNAVVRRGSPQSAKDPCGAPTAILTLYLPAAT-T-AVFFEPGVARVSDDMKSLLQHSDAADDSCDFTQRPFPDQYTFFKEHNLCEAKAAITSKTQYFLSDSSAPPGPKERHQLASLLRRPPIQLDNVAGAVVTGAGAGGVGGGRLEETRLLWKYRHFICR-DGKYFLPFMRCVDWANTHSSERRAACALIYQWARPAFEDVLACLSFYFDHVAPVRQYAVRLLRREGDGRLCQLAFQLVQAVRYDSAE-AELANFLVERAVGCWELCSTLYTLLSVEVALEKRRTLSAAGKASDDRHGGRALFEPLLRRLSERLTQQCPHFATRLRQQHAMHRVLQLLSRQLQQSSLDRLGKTALGNKLIAKQACGLRALFSSVHHGMPSRRNVNGSFSSSLMTHSSAGMREEHSMSSARTGDGSEEADANGGDGSSAVEASDVDSAADDEVRRLRFPPLSPQSQGSAPRSPPSQSGAKQQYRSRHASAVDVLDRYGVATLATHPGIPITGLLSDSLYIFKSAKLPMRLTFTALRPAGLAWGGGRGGEPLYGASPSPCLLTPLAMQPAPSQQRSGGLQGMNSSGGGASAAVAAEEQAEGFLGAGEGDTVPLAMMYKYNDDIRQDQLIVQLIRLMDDLLQRDGLQLYLTPYRVIATAPNEGLVEIVPQVTTFFSVQ-----RDVLKYLRVYNSTAELLRQAMDRYTRSFAGYCVITFVLGIGDRHLENILITQDGRLLHIDFGYVLGNDPKP---FPPPMKINREMVEVLGG---PQSTGFTEFKLYCCSAYNTLRKHAPLLLHILLLGAHTEGMPQVTGEGGDPRVNLLKVQEKLRLDLTNAQATQYLQNVIADSVG-SIFTNLWDVLHAAAQATRG
5VLR Chain:A ((321-1012))---------------------------------------------------------------------------ERMKLVVQAGLFHGNEMLCKTVSSSEVSVCS----------------------EP-VWKQRLEFDINICDLPRMARLCFALYAVIEKAKADCPIAWANLMLFDYKDQLKTGERCLYMWPSVPDEK--------------------G-----ELLNPTGT-----V---RSN-------------PNTDSAAALLICLPEVAPHPVYYPALE---------------------------------------KILE-----LGRH-----------TEEEQLQLREILE----G-------EL-----------YEHEKDLVWKLRHEVQEHFPEALARLLLVTKWNK--HEDVAQMLYLLCSWPELPVLSALELLDFSFP-DCHVGSFAIKSLRKLTDDELFQYLLQLVQVLKYESYLDCELTKFLLDRALANRKIGHFLFWHLRSEMHVPSV----------------ALRFGLILEAYCRGSTH----HMKVLMKQGEALSKLKALNDFVKLSSQKTPKP--QTKELMHL---------------------------------------------------------------------------------CMRQ-------------------------------EAYLEA-LSHLQSPLDPSTLLAEVCVEQCTFMDSKMKPLWIMYSNEEA-----------------------------------------------------------------------S--VGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLRSDTIANIQLNFNKDALLNWLKSKNPG-EALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHFLGNF---INRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAA-GLPELSCS-----KDIQYLKDSLALGKTEEEALKHFRVKFNEALRESWK----------------


General information:
TITO was launched using:
RESULT:

Template: 5VLR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3050 -95019 -31.15 -150.58
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -31.15
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_5VLR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5VLR-query.scw
PDB file : Tito_Scwrl_5VLR.pdb: