Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEQCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAYNLSTSPNLEQVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHQFLEGKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGYEKTFKSLNQLEQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
3KKS Chain:B ((2-145))SHLWQMDNTH----W--NKTIIWVAVETNSGLVEAQVIPE-ETALQVALCILQLIQRY-TV-LHLHSDNGPCFTAHRIENLCKYLGITKTTGIPYNPQSQGVVERAHRDLKDRLAAY----QGDCETVEAALSLALVSLNKK-RGG-IGGHTPYEIYLE---


General information:
TITO was launched using:
RESULT:

Template: 3KKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 631 -67420 -106.85 -468.19
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -106.85
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_3KKS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KKS-query.scw
PDB file : Tito_Scwrl_3KKS.pdb: