Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQSSAALNSPNPMKKKVITALIAVAIGHIGVLWAVSHIKPAELKPIDKKPLQVRFVKIQEQPKPLPPKPKE-----PPKKPEPKKEVKEVKVVE----KPVTPPKKVEKIQQVKKAETP----------KETVKTEPKVETKVVTTT---TTVTEKVVEKPKPVVQEAPKAQPA-----PDPSPKRVSIGGSG-----VQWSRSPR--------LTVSPKDLQGEARSVVVLIEAD--------EKGKIINVRVTRSSGISSLDDKVVRAVRGAKFKPYMENGVAYPIRAEQPFDLNP----------------------------------------------
4FHL Chain:A ((2-392))GSMTLSSNQYQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEESTGLTLQELFTIQTGLPTLHLSFSSSCSYSENSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLTELVKNPWLLTLNTLPLVNSSLANVRWIGSDGSGILAMCKSGAWLRWNLFKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMGFT


General information:
TITO was launched using:
RESULT:

Template: 4FHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1337 31703 23.71 126.30
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 23.71
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.124

(partial model without unconserved sides chains):
PDB file : Tito_4FHL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FHL-query.scw
PDB file : Tito_Scwrl_4FHL.pdb: