Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIVERPSYTSKDVEVTSREPLFSGFIQVEKVSLRHRLFNQSEYTPVLQRELVHRPEAAGVLLYNDQKQQFALIEQFRVGALDDSHSPWQL-EIIAGVLDGNESPESCIRCESLEESGCEVQDLEHLFSFYPSAGACSELFHLYVAETN--LPAVGGVFGVDNEGENIQLHLFSYSEIQTLLNSGRLRNAPVIMALQWLAQHSKTIINPKR
3O52 Chain:B ((38-184))------------------------------------------------KREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDN---------------DIEVLELPFSQALEMIKTGEIRDGKTVLLLNYL------------


General information:
TITO was launched using:
RESULT:

Template: 3O52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 599 -41575 -69.41 -314.96
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -69.41
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.397

(partial model without unconserved sides chains):
PDB file : Tito_3O52.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O52-query.scw
PDB file : Tito_Scwrl_3O52.pdb: