Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQHQSLFNKSQWTQLVKHFSAVAVLGLTIAAPAWAIDPTAKELRIGFQKSSINFAIAKQQKLFEQEFPNAKITWNEFPAGPQILEALAVGSLDVGVTGDTPPVYAQAAGKPLYYIAYEAAKP-LASAILVPKNSQLKQLKDIKGKRIALQKGSSSHY-LLVQAVRKAGLKWSDITPIWL-TPADARAAFQKGAVDAWAIWDPYYAS-AQLEDQARVLV---SGKGLSPN------YTFYLAAPNFVKQYPKAVPGLIKQINQADKWVQSYQVETASAI--GQSTGLKPATSDLFIKRR-PRPSSAAPLNSKVIAEQQQIADIFTQQGIIPKPISIKQAV---WGAK-------
3QSL Chain:A ((28-345))----QKLEKAKVQIAVGGKPLIYYLPLTIAEV---------------------------KGFFKDE--GLDVSIADFAGGSKALQAVVGGSADVVSGAFEHTLSLQAKGQFYRAFALQGRAPMIGVGVSKKNLPGYKGPADLKGRKIGVTAPGSSTNMVVNFFLAKHGLKASDVSFIGVGAGAGAVTALRSGQIDAISNTDPV-VSMLETSGDIQIIVDTRTLKDTKEIFGGNMPAGCLYAPQAFVDANPNTAQALTNAIVRADKWIQKAGADEIAKAVPEGYLLGDPAVYKAAIGKSMEGLSPDGVIPEDGAATALKALAAF-VPDFDAAKVDPAKAWTNEYTRRANEKYPN


General information:
TITO was launched using:
RESULT:

Template: 3QSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1849 19210 10.39 65.79
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 10.39
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_3QSL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QSL-query.scw
PDB file : Tito_Scwrl_3QSL.pdb: