Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MDDQKETIMQTFSPKAVIERLQNIVGRSYVLTDDQSTRQYRQGRRFGEGKVLAVVVPGTLLEQWQVLQAAIEAGCIVIMQAANTGLTGGSTPYGDDYDRPVLVMSTRRLKGIQVIHDGKQVICLPGATLDNLEQILKGYDREPHSVIGSSCIGASVLGGVCNNSGGALVRRGPAYTELALYAQVNAAGQLELVNHLGVNLGSTPEEILTRLEKQQYQAVDILDDNEKQASDHRYGHDVTQVDEDTPARFNADPSRLFEASGSAGKVCVFAVRLDTYEKVESSVFYIGSNDADDLTAIRRYLLTSLPSLPIAGEYIHRDAYLIGEKYGKDTFLFIEKFGTANVPKAFAMKDKVDGFLEKFKIKGLTDQILQAITFFLPSHLPKRMTEYRDRYEHHLVLRVENNSKAQTEQFLKEYFTVHQSGNYFVCSEEEGRKAFLHRFAIAGAAIRYRDT---HRSEVEDIVALDIALRRNDREWVEQLPAEMEKKIIHKLYYGHFFCHVFHQDYILKKGHDPLEIEHQMWKLLDARRAEYPAEHNVGHLYIAKPALANFYQKLDPTNSFNVGIGHTSKLKYWGKAKS 2VFR Chain:A ((4-421)) -------------------FMSDITVTNWAGNITYTAKELLRPH------------------SLDALRALVADSARVRVLGSGHSFNEIAEPGDG----GVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELARVVHARGLALPNM--ASLPHISVAGSVATGTHGSGVGNGSLASVVREVELVTADGSTVVIAR---------------------------------------GDERFGG--------------AVTSLGALGVVTSLTLDLEPAYEMEQHVFTELPLAGLDPATFETVMAAAY--SVSLFTDWR-----------APGFRQVWLKRRTDRPL-----DGFPYAAPAAEKMHPVPGMPAVNCT--------EQFGVPGPWHERLPHFRAEFTPSSGAELQSEYLMPREHALAALHAMDAIRETLAPVLQTCEIRTVAADAQWLSPAYGRDTVAAHFTWV-EDTAAVLPVVRRLEEALVPFAARPHW------------------------------GKVFTVPAGELRALYPRLADFGALAGALDPAGKFT--------NAFVRGVLA

General information: TITO was launched using: RESULT: Template: 2VFR.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2479 -138755 -55.97 -334.35 target 2D structure prediction score : 0.50 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : -55.97 2D Compatibility (Sec. Struct. Predict.) : 0.50 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.276

(partial model without unconserved sides chains): PDB file : Tito_2VFR.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2VFR-query.scw PDB file : Tito_Scwrl_2VFR.pdb: