Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLLYFIIGCCIGS-FLCLTAQRIPLGHSIIYPRSHC------VKCCRSLSWYELIPILSIIVQR-----FRCRYCRCRLPFYYLLAEALCGGLFAWFFTFSSARN-FS-TFI-WMLSALLFSLMDLFY-FMVHSHTLFCSWAILWIFWLQAGVFQWQSVLLTFIVGGVCLRYGQSYL-GAGDTLLMLSW-SGGLSLEELLQILFLASLFGISVFSVYFICHKK-KLEKLPFIPFLSSAL-----LIVLHLRY 1TWD Chain:A ((2-248)) ----ALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSG-------------QKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQ-ASPMRYRNYSRYIVDGAAVAEMKGIIERHQAK

General information: TITO was launched using: RESULT: Template: 1TWD.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1083 -98935 -91.35 -471.12 target 2D structure prediction score : 0.33 Monomeric hydrophicity matching model chain A : 0.58 3D Compatibility (PKB) : -91.35 2D Compatibility (Sec. Struct. Predict.) : 0.33 1D Compatibility (Hydrophobicity) : 0.58 QMean score : 0.169

(partial model without unconserved sides chains): PDB file : Tito_1TWD.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1TWD-query.scw PDB file : Tito_Scwrl_1TWD.pdb: