Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRMPSVFTAPSTYMADLEVGAATAYHAHSEAATAGESDTCKPAATTASTRPPLAPHAADADAHNAVELSISSTAVAPAYQLRGELGRGQYGCVYLVEECVRHHLLAVKATYDPIQVAAVRERQRRQERQQQKPSKGSGGCAREAAFSPYAQHEEGHAVVPFPPLLPHFSNEVMCLREC-HSPFIVRLEGADKGENGEDLLLMEYVDCGDLRREIRRRCAAGTPFTETEAVFVFLQLCMAVDHLHQLNILHHDLKPENVMLSSTGIIKLGDFGFAKKYREPVSQRVASTGCGTPYYLSPEALR------GDRYSLKSEMWALGVILYELLALTGPFAAATRAELRAKVHNSDYAK---LPATYSNELRSVCYQLLTLDPDQRPSTRDLFQDNEYLREKLNALRRISECSVNMSTEEKGSMFHSISAALRRKPPSAKGPATASFNLGWGGSCKISSHGHGSARPEAAPKPRVERPAEMTPVARTRSVC
2Y7J Chain:D ((93-364))---------------------------------------------------------------------------YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV----RLSPE--------------------------------------QLEEVREATRRETHILRQVAGHPHIITLIDSYE-SSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH-PFFE-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Y7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1194 -53983 -45.21 -208.43
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.65

3D Compatibility (PKB) : -45.21
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_2Y7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y7J-query.scw
PDB file : Tito_Scwrl_2Y7J.pdb: