Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------STSTKVKLENRKEPAL--CHVVIIKPAQIRHPLDTWVETFAWVKAGKVV-----------EWHSPKYGSVKVKTDEDDCHLTFLVNELINGYTCQLSR--------------
1TTW Chain:A ((3-120))TYSSLLEEFATELGLEEIETNELGHGAVTIDKIWVVHLAPINEKELVAFMRAGILTGQSQLYDILRKNLFSPLSGVIRCALDKDD-HWLLWSQLNINDTSGTQLASVLTSLVDKAVTLS


General information:
TITO was launched using:
RESULT:

Template: 1TTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 177 -8043 -45.44 -95.75
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -45.44
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_1TTW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TTW-query.scw
PDB file : Tito_Scwrl_1TTW.pdb: