Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWYNLFMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEKTGELNHQVK-GTKPRKVD---RDRLKNYLTDNPDAYLTEIASEF----------GCHPTTIHYALKAMGYTRKKEPHLL
6PAX Chain:A ((14-132))----NGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGRYYATGSIRPRAIGGSKPRVATPEVVSKIAQYKQECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ------


General information:
TITO was launched using:
RESULT:

Template: 6PAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 263 -35193 -133.81 -335.17
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -133.81
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.660

(partial model without unconserved sides chains):
PDB file : Tito_6PAX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6PAX-query.scw
PDB file : Tito_Scwrl_6PAX.pdb: