Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAVFASGNGSNFQVIAE-------EFPVEFVFSDHRDAYVLERAKQLGVLSYAFELKEFESKTDYEAALVELLEEHQIDLVCLAGYMKIVGPTLLSAYEGRIVNIHPAYLPEFPGAHGIEDAWNAGVGQSGVTIHWVDSGVDTGQVIKQVRVPRLADDTIDRFEARIHEAEYRLYPEVVKALFTD
1CDE Chain:D ((2-182))--NIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVIS-----


General information:
TITO was launched using:
RESULT:

Template: 1CDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 830 -8723 -10.51 -50.13
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -10.51
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_1CDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CDE-query.scw
PDB file : Tito_Scwrl_1CDE.pdb: