Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSLTPVEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMNDDLIQALRNRT-PIETDPKLDTLAKFTLAVINTK-GRVGDEALSEFLEAGYTQQNALDVVFGVSLAILCNYANNLANTPINPELQPYA
2GMY Chain:A ((3-148))--------------------------------TRINYAKASPEAFKAVMALENYVQSSGLEHRFIHLIKLRASIINGCAFCVDMHVKESR-HDGLSEQWINLMSVWRESPVYTEQERALLGWVDAVTKIAETGAPDDAFETLR-AHFSDEEIVKITVAIGAINTWNRIAVGFRSQHPVEA----


General information:
TITO was launched using:
RESULT:

Template: 2GMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 550 -49898 -90.72 -346.51
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -90.72
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_2GMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GMY-query.scw
PDB file : Tito_Scwrl_2GMY.pdb: