Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQCYTDVTEFAIPVSTQKLYLSPVLDGFNSEIIAYNLSTSPNLEQVQTMLEQAFTEKHYENTILHSDQGWQYQHDSYHRFLESKGIQASMSRKGNSQDNGMMESFFGILKSEMFYGYEKTFKSLNQLEQAIIDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
3VQ6 Chain:A ((4-148))PGIWQLDCTHL------EGKVILVAVHVASGYIEAEVIPA-ETGQETAYFLLKLAGRW-PV-KTVHTDNGSNFTSTTVKAACDWAGIKQEDGIP-------VIESMNKELKKIIGQV----RDQAEHLKTAVQMAVFIHNH-KRKGGIGGYSAGERIVD---


General information:
TITO was launched using:
RESULT:

Template: 3VQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 626 -60676 -96.93 -439.68
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -96.93
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_3VQ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VQ6-query.scw
PDB file : Tito_Scwrl_3VQ6.pdb: