Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDTIIIGAGPAGMTAALYAARSNLKVALIEGGLPGGQMNNTSDIENYPGYANISGPELAEKMFEPLENLGVEHIYGYVENVEDHGDFKKVMTDDQ-TYETRTVIVATGSKHRPLGVPGEEELNSRGVSYCAVCDGAFFRDQDLLVVGGGDSAVEEALFLTRFAKTVTIVHRRDQLRAQKVLQDRAFANEKISFIWDSVVKEIKGENRVESVVFENVKTGQVTEQAFGGVFIYVGLDPLSDFVKELNIQ-DQAGWIVTDSHMKTAVDGIFAVGDVRLKDL--RQVTTAVGDGAIAGQEAYKFITEHS
3F8R Chain:C ((16-319))-FDVIIVGLGPAAYGAALYSARYMLK-TLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIEN---EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-


General information:
TITO was launched using:
RESULT:

Template: 3F8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1804 -82916 -45.96 -279.18
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.83

3D Compatibility (PKB) : -45.96
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3F8R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8R-query.scw
PDB file : Tito_Scwrl_3F8R.pdb: