Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKAFGIVLLVLAAWILLQGNFGIPSLDGKIWPLLGIVFFAYKSIESILRRHLTSAVFTGLLAIIIANYAYDLLPVTNHSLIWASILVVLGVGYLTHSSKFWNEKKWWYNGKKTVVTDKEVAFGSGTFYKQDQDLVDDQVEVAFGDAKIYYDNAEMLGDFATLNIEVAFGNATVYVPQHWRVDLKVETSFGAAKADAPVAPTSKTLTIRGDVAFGKLEIVYVK
1P9H Chain:A ((32-220))PNLTAVQISPNADPALGLEYGLNASAKGIH-----------------SIAIGATAEAAKGAAVAV------------GAGSIATGVNSVAIGPLSKALGDSAVTY------GAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAAN----------HGYSIAIGDRSKTDRENSVSIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEK


General information:
TITO was launched using:
RESULT:

Template: 1P9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1041 -43703 -41.98 -244.15
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -41.98
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_1P9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P9H-query.scw
PDB file : Tito_Scwrl_1P9H.pdb: