Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIQLYLLKLELFWFELHQHYHFSEPQKILNELIAAYSAAYSEKQRAYHTVQHLYECLSLIETVQSE-LNDPYAVALALWFHDVVYEPQALDNELKSAELFEQLMAQ-DLQLDTMQKIKRWILATQKHA-----PTDETDLQFLLDID-LAILAA-TPERFMQYEQQIQQ-EYSWA-------DPEVYSIK----RKEVLMNFYQSEPLYQTAYFQKNFELNAKQNLKKILE
2PJQ Chain:B ((18-199))-----------------------------------------LAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVI---LMA-NPAKAHQDLIVQLNAQNVTADDQTAIFAIIDHMSFSKSFNGPQKLSLEGQVVQDADRLDAIGAIGIARALYYSGHVGEKIYDPAIAPREHMTREQYRHQPGTAINHFYEKLFKLAALMNTDTAKALAAHRTA--------


General information:
TITO was launched using:
RESULT:

Template: 2PJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 597 -19706 -33.01 -124.72
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -33.01
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_2PJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PJQ-query.scw
PDB file : Tito_Scwrl_2PJQ.pdb: