Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKPVPKIYRTTNWSSYNQALIKRGNISIWFD--PKTQWYAQPQGKHGRNQTYSDAAIQCC------------LMIKSLFRLSLRMVTGFAQSLIKLCGLNWTAPDYS-------TLCRRQKRIDIAISYQQSRDGLHLLVDSTG-----LKFLGEGEWKRKKHQPAYRRQWRKLHIGID---AKTLQIRAVQLTTNNVSDSQVLGDLLDQIPLDERIDSVYTEG-AY----DTKHCRQV---------------ILDRDAHAV---------------IPPRKNAKPWKDK-KLRSLERNELLKTVKRLGR--------SLWKKWSGYHRRSLVETKMHCIK--------
4QNU Chain:A ((1-323))----------MIDFGNFYS-LIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNL--MPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGA---------------HLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARKP


General information:
TITO was launched using:
RESULT:

Template: 4QNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1149 3326 2.89 13.74
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 2.89
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_4QNU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QNU-query.scw
PDB file : Tito_Scwrl_4QNU.pdb: