Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNIRIGSYHWMQTTNGQLSFKEKIK-------LIQKIMVPSILSSIKINYYRFQTGNDFDIGQIVIPDTQMIKIALEELESKASISIYNHSWRTYF-------WGAALGHLQNQQFDPESLLLASLFH------DIGLTEQHMHSKGCQCF------------------TYESAKQFEQKAKEYNFDDKKSEVIKDAICLHMNGYIEDSDPPEVVLLQQGASCDVISDNQYKLPLSFRNKILEKYPRNQFNKEFIKLINLERKNVPNSRTGLLYDLGLPLMIKSNLYNENLI
4U0O Chain:B ((8-288))PSWLRISTVQRLVRQYGIHTICEEGRCPNRGECYGQKTATFLLLGPTCTRACAFCQVEKGHAPAAVDPE-EPTKIAAAVATLGLRYVVLTSVARDDLPDQGAGQFVATMAAIRQRCPGTEIEVLSPDFRMDRGRLSQRDCIAQIVAAQPACYNHNLETVRRLQGPVRRGATYESSLRVLATVKELNPD------IPTKSGLMLGLGETEAEIIETLKDLRRVGCDRLTLGQYLPPSLSHLPVVKYWTPEEFNTLGNIAREL---GFSHVRSG-------PLVRSSYHAAE---


General information:
TITO was launched using:
RESULT:

Template: 4U0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1201 20990 17.48 89.32
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : 17.48
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.178

(partial model without unconserved sides chains):
PDB file : Tito_4U0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U0O-query.scw
PDB file : Tito_Scwrl_4U0O.pdb: